Index

_

__init__() (twodanalysis.BioPolymer2D method)

A

add_defects() (twodanalysis.Packing.PackingDefects method) add_small_matrix() (twodanalysis.Packing.PackingDefects static method)

all_lip_order() (twodanalysis.Cumulative2D.Cumulative2D method) atgroup2nx() (twodanalysis.MembProp.MembProp method)

B

BioPolymer2D (class in twodanalysis) (class in twodanalysis.BioPolymer2D)

C

chain_structure() (twodanalysis.MembProp.MembProp method) computeRG2D() (twodanalysis.BioPolymer2D.BioPolymer2D method) count_order() (twodanalysis.Cumulative2D.Cumulative2D static method)

create_circle_array() (twodanalysis.Packing.PackingDefects static method) Cumulative2D (class in twodanalysis.Cumulative2D) cut_structure() (twodanalysis.MembProp.MembProp method)

E

extend_data() (twodanalysis.MembProp.MembProp static method)

F

FilterMinFrames() (twodanalysis.BioPolymer2D.BioPolymer2D static method)

G

get_highest() (twodanalysis.Packing.PackingDefects static method) get_indexes() (twodanalysis.Packing.PackingDefects method) getAreas() (twodanalysis.BioPolymer2D.BioPolymer2D static method) getCOMs() (twodanalysis.BioPolymer2D.BioPolymer2D method)

getHbonds() (twodanalysis.BioPolymer2D.BioPolymer2D method) getKDEAnalysis() (twodanalysis.BioPolymer2D.BioPolymer2D method) getPositions() (twodanalysis.BioPolymer2D.BioPolymer2D method) getRgs2D() (twodanalysis.BioPolymer2D.BioPolymer2D method)

H

HbondsPerResidues() (twodanalysis.BioPolymer2D.BioPolymer2D method)

height_matrix() (twodanalysis.Cumulative2D.Cumulative2D method) histogram2D() (twodanalysis.Cumulative2D.Cumulative2D method)

I

INFO() (twodanalysis.BioPolymer2D.BioPolymer2D method)

K

KDEAnalysisSelection() (twodanalysis.BioPolymer2D.BioPolymer2D method)

L

ListPathsInLevel() (twodanalysis.BioPolymer2D.BioPolymer2D static method)

M

map_voronoi() (twodanalysis.Voronoi2D.Voronoi2D method) MembProp (class in twodanalysis.MembProp)

module twodanalysis twodanalysis.data

N

numpyhistogram2D() (twodanalysis.Cumulative2D.Cumulative2D method)

O

order_matrix() (twodanalysis.Cumulative2D.Cumulative2D method)

P

packing_defects() (twodanalysis.Packing.PackingDefects method) packing_defects_stats() (twodanalysis.Packing.PackingDefects method) PackingDefects (class in twodanalysis.Packing) plotHbondsPerResidues() (twodanalysis.BioPolymer2D.BioPolymer2D method)

plotPathsInLevel() (twodanalysis.BioPolymer2D.BioPolymer2D static method) PolarAnalysis() (twodanalysis.BioPolymer2D.BioPolymer2D method) project_property() (twodanalysis.Cumulative2D.Cumulative2D method) (twodanalysis.Voronoi2D.Voronoi2D method)

R

RgPerpvsRgsPar() (twodanalysis.BioPolymer2D.BioPolymer2D method)

S

splay_matrix() (twodanalysis.Cumulative2D.Cumulative2D method)

surface() (twodanalysis.Cumulative2D.Cumulative2D method)

T

thickness() (twodanalysis.Cumulative2D.Cumulative2D method) twodanalysis module

twodanalysis.data module

V

visualize_polarity() (twodanalysis.MembProp.MembProp method) Voronoi2D (class in twodanalysis.Voronoi2D) voronoi_all_lip_order() (twodanalysis.Voronoi2D.Voronoi2D method) voronoi_apl() (twodanalysis.Voronoi2D.Voronoi2D method)

voronoi_height() (twodanalysis.Voronoi2D.Voronoi2D method) voronoi_order() (twodanalysis.Voronoi2D.Voronoi2D method) voronoi_properties() (twodanalysis.Voronoi2D.Voronoi2D method) voronoi_splay() (twodanalysis.Voronoi2D.Voronoi2D method) voronoi_thickness() (twodanalysis.Voronoi2D.Voronoi2D method)

W

windows_apl() (twodanalysis.Voronoi2D.Voronoi2D method)